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divbase-cli

This tool lets you interact with your DivBase project(s) in order to:

  • Query the metadata for the VCF files stored in the project.

  • Upload/download files to/from the project.

  • Version the state of all files in the entire project at a given timestamp.

For user guides and full documentation, see: https://scilifelabdatacentre.github.io/divbase

Usage:

$ divbase-cli [OPTIONS] COMMAND [ARGS]...

Options:

  • -v, --version: Show the currently installed version of the divbase-cli package.
  • --install-completion: Install completion for the current shell.
  • --show-completion: Show completion for the current shell, to copy it or customize the installation.
  • --help: Show this message and exit.

Commands:

  • auth: Log in/out of DivBase and manage your...
  • config: Manage your user configuration file for...
  • dimensions: Create and inspect dimensions (number of...
  • files: Upload, download, list and manage files in...
  • query: Query the sample metadata and VCF files...
  • task-history: View the status of tasks submitted to...
  • version: Add, view and remove versions representing...